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السبت، 27 أكتوبر 2012

Book on Biological Laboratory penalty tenth

Book on Biological Laboratory penalty tenth
 
 


Page 23

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\02\v01  Page 7 of  7
Technical Manual   

SUMMARY OF RESULTS - 18- 24 HOUR PROCEDURE (cont'd)

TUBE INCUBATION POSITIVE NEGATIVE COMMENTS

After reading GLU reaction, add 2 drops 0.8% sulfanilic acid
and 2 drops 0.5% N. N-dimethyl-alpha-naphthylamine

GLU
NO2

N2
 gas
Red

Bubbles: Yellow
after reagents
and zinc
Yellow

Orange after
reagents and
zinc

(1)  Before addition of reagents, observe GLU
tube (positive or negative) for bubbles.
Bubbles are indicative of reduction of
nitrate to the nitrogenous (N
2
) state.
(2)  A positive reaction may take 2-3 minutes
for the red colour to appear.
(3)  Confirm a negative test by adding zinc
dust or 20 mesh granular zinc.  A pink-orange colour after 10 minutes confirms a
negative reaction.  A yellow colour
indicates reduction of nitrates to the
nitrogenous (N
2
) state.


After reading carbohydrate reaction, add 1 drop 1.5% H2 O2


MAN
INO
SOR
Catalase
 
Bubbles

No bubbles

(1)  Bubbles may take 1-2 minutes to appear. 
(2)  Best results will be obtained if the test is
run in tubes which have no gas from
fermentation.

PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 24

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\03\v01  Page 1 of  4

Section: Technical Manual  Subject Title: API Test Strips - API 20NE
Issued by:  LABORATORY MANAGER   Original Date: August 3, 2003
Approved by: Laboratory Director

Revision Date:


IDENTIFICATION OF NON-ENTERIC  GRAM-NEGATIVE RODS (API 20NE)

Principle

The API 20NE system facilitates the identificat ion of non-fastidious Gram-negative rods not
belonging to the  Enterobacteriaceae within 48 hours.

The API 20NE strip consists of microtubes contai ning dehydrated media and substrates. The media
microtubes containing conventional tests are in oculated with a bacterial suspension which
reconstitutes the media. After incubation, the metabolic end produc ts are detected by indicator
systems or the addition of reagents. The substr ate microtubes contain assimilation tests and are
inoculated with a minimal medium. If the bact eria are capable of utilizing the corresponding
substrate, then they will grow.

Materials

API 20NE strips - store at 2-8
0
C
0.85% sterile saline
Mineral oil
Zinc dust
AUX Medium                                  }
James Reagent                                 }
Nitrate 1 - store at 2-8
0
C                }                Store at 2-8
0
C
Nitrate 2 - store at 2-8
0
C                }
      Oxidase Reagent

Procedure
1.   Preparation of Inoculum
a)   Add 2 ml. of 0.85% saline  to a sterile test tube.
b)   Using a sterile inoculating loop, carefully touch the centre of a well isolated
colony (2-3 mm. Diameter) and thoroughly em ulsify in the saline. The suspension
turbidity should be equal to a 0.5 McFarland standard.

2.   Preparation of the Strip

a)   An incubation tray and lid are supplied for each strip.
b)   Dispense 5 ml of distilled water in to the tray.

PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 25

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\03\v01  Page 2 of  4
Technical Manual   

3.   Inoculation of the Strip

a)   Remove the cap from the tube containing the bacterial suspension and insert a
sterile pipette.
b)   Tilt the API 20NE incubation tray an d fill the TUBE section of the NO 3
 to PNPG
microtubes by placing the pipette tip  against the side of the cupule.
c)   Open an ampule of AUX Medium and add 200 uL of the bacterial suspension to
the ampule. Mix well with a pipette while  avoiding the formation of air bubbles.
d)   Using the AUX Medium bacterial suspension, fill both the TUBE and CUPULE
section of [GLU ] to [PAC ]. Do not overfill the cupules. Fi ll to a flat or slightly
convex meniscus.
e)   After inoculation, completely fill the CUPULE section of the 3 unde rlined tests,      
  GLU, ADH  and URE  tubes with mineral oil.
f)   Using the excess bacterial suspension, i noculate an agar slant or plate (non-selective media such as nutrient agar, blood ag ar or tryptic (tryp ticase) soy agar is
suggested) as a purity check and for  oxidase testing, and/or additional
biochemical testing.  Incubate the slant or plate with the API 20NE strip.

4.   Incubation of the Strip

a)   After inoculation, place the plastic lid on the tray and incubate the strip for 24
hours at 30
0
C in a non-CO 2
 incubator.

5.   Reading the Strip

a)   After 24 hours incubation, record all reactions not re quiring the addition of
reagents.
b)   Perform the oxidase test.

A portion of the growth from the agar slate or plate, inoculated from the 20NE
bacterial suspension, should be rubbed  onto filter paper to which a drop of
oxidase reagent (1% tetramethyl-p-phenylen ediamine dihydrochloride) has been
added.  The area where the growth has been  added will turn dark purple within 10
seconds if the reaction is positive and will be colourless or light purple if
negative.
  Note:  (a)  Nichrome wire loops should NOT be used in performing
the oxidase test.  Nichrome wire can cause a false  positivereaction.

(b)  The oxidase test should NOT  be performed using bacterial
growth from selective media  such as MacConkey, EMB, etc.


PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 26
TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\03\v01  Page 3 of  4
Technical Manual   

c)   Assimilation tests are observed for bacterial growth. An opaque cupule indicates a
positive reaction.
d)   Protect the assimilation tests with the incubation tray lid during the reading of the
Nitrate
and TRP tests.
e)   Perform the Nitrate test.

i.   Add one drop of Nitrate 1 and one  drop of Nitrate 2 reagents to NO
3
cupule.
ii.   After 5 minutes a red color indicates a positive reaction.
iii.  A negative reaction may be due to th e production of nitrogen. Add Zinc
dust to the NO 3
cupule. After 5 minutes a colorless cupule indicates a
positive reaction. A pink-red cupule indicates a negative reaction.

f)   Perform the TRP test.

i.   Add one drop of JAMES Reagent.
ii.   The reaction takes place immediately, producing a pink color in the entire
cupule if the reaction is positive.

Interpretation

1.   Use the API 20NE analytical profile index.
 
2.   The tests are separated into groups of three.   The following numerical value is assigned to
each positive reaction recorded:

1 - positive reaction in the first test of the group
2 - positive reaction in the second test of the group
4 - positive reaction in the third test of the group

  By adding the values corresponding to posit ive reactions in each group, a seven digit
            number is obtained.

3.   The strip must be reincubated in the following cases:

i.   If the profile cannot be found in the Analytical Profile Index.
ii.   If the following note is indicated for the profile obtained:

IDENTIFICATION NOT VALID
BEFORE 48-HR INCUBATION
iii.  If the strip is to be reincubate d, remove the reagents from the NO3
and
TRP cupules and then cover these tests with mineral oil.


PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 27
TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\03\v01  Page 4 of  4
Technical Manual   

iv.  Reincubate the strip for another 24 hours at 30
0
C in a non-CO 2
 incubator.
v.   Read all the tests again, except for NO3,
 TRP and GLU.

READING TABLE

TESTS SUBSTRATES REACTONS/ENZYMES NEGATIVE
RESULTS
POSITIVE
RESULTS
NITrate reduction to
nitrites
NIT 1 + NIT 2 / 5 min
        colourless                   pink-red
N03
 Potassium
nitrate
NITrates to nitrogen  Zn / 5 min
       pink                      colourless
TRP tryptophane  indole production  JAMES / immediate
       colourless /                    pink
pale green / yellow
GLU  glucose  Acidification  blue to green  yellow
ADH arginine  arginine dihydrolase yellow orange/pink/red
URE  urea  Urease  yellow  orange/pink/red
ESC esculin  hydrolysis ( β -glucosidase)  yellow grey/brown/black
GEL gelatine
(with India ink)
hydrolysis (protease)  no pigment
diffusion
diffusion of black
pigment
PNPG  p-nitrophenyl- β -D-galactopyranoside
β -galactosidase  colourless




MUG negative: Colourless


 Indole positive: Red colour after addition of Kovac's
  Indole negative:  Kovac's remains yellow

 MUG   INDOLE   INTERPRETATION / ACTOIN

  +     +   report as E. coli
  -     +   set up VITEK  Identification
  +     -   set up VITEK  Identification
  -     -   set up VITEK  Identification

PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 
 

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