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السبت، 27 أكتوبر 2012

A book about the second penalty Biological Laboratory

A book about the second penalty Biological Laboratory
 
 

yellow
[GLU ] glucose  Assimilation  transparent  opaque
[ARA ] arabinose  Assimilation  transparent  opaque
[MNE ] mannose  Assimilation  transparent  opaque
[MAN ] mannitol  Assimilation  transparent  opaque
[NAG ] N-acetyl-glucosamine Assimilation  transparent  opaque
[MAL ] maltose  Assimilation  transparent  opaque
[GNT ] gluconate  Assimilation  transparent  opaque
[CAP] caprate  Assimilation  transparent  opaque
[ADI] adipate  Assimilation  transparent  opaque
[MLT ] malate  Assimilation  transparent  opaque
[CIT ] citrate  Assimilation  transparent  opaque
[PAC] phenyl-acetate  Assimilation  transparent  opaque
OX  see oxidase test  cytochrome oxidase  colorless/
light purple
dark purple


PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 28

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\04\v03  Page 1 of  4
Section: Technical Manual  Subject Title: API  Test Strips - API NH
Issued by:  LABORATORY MANAGER   Original Date: July 31, 2000
Approved by: Laboratory Director

Revision Date: August 3, 2003

SYSTEM FOR IDENTIFICATION OF NEISSERIA & HAEMOPHILUS (API  NH)

Principle

The API NH strip consists of 10 microtubes containing dehydrated substrat es, which enable the
performance of 12 identification te sts (enzymatic reactions or suga r fermentations), as well as the
detection of a penicillinase (particular interest in  Haemophilus influenzae, Haemophilus
parainfluenzae, Branhamella catarrhalis (Moraxella catarrhalis)  and  Neisseria gonorrhoeae).

The reactions produced during incubation result in spontaneous color changes or are revealed by
the addition of reagents.

After a 2-hour incubation period at a temperature of 35-37
o
C, the reading of the reactions is
performed visually and identification is obtained by consulting the profile list.

Reagents

API NH strips
NaCl 0.85% Medium (2 ml)
JAMES reagent
ZYM B reagent
Swab
Incubation box
Result sheet
1 package insert
McFarland Standard, point 4 on the scale
Mineral oil
Pipettes
Ampule rack
Ampule protector

Procedure

1.   Specimen Processing

The microorganisms to be identified must first be  isolated as separate colonies by streaking the
specimen onto Blood agar, Chocolate agar or Martin-Lewis agar according to standard

PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 29

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\04\v03  Page 2 of  4
Technical Manual   

microbial techniques.

2.   Preparation of Strip

Each strip is composed of 10 cupules.  Each  cupule has an open and closed area (cupule
and tube).  An incubation tray is supplied  for each strip.  It serves as a support and
individual chamber while both  protecting the strip from contaminants in the air and
assuring the humid atmosphere necessary  to avoid dehydration during incubation.

•   Remove the strip from its individual packaging
•   Place the strip in the incubation box
•   Discard the desiccant sachet

Record the specimen number on the flat portion of the tray (do not record the number on
the lid as it may be misplaced during handling).

3.   Preparation of the Inoculum

•   Open an ampule of NaCl 0.85% Medium  (2 ml) with the ampule protector.
  •   Using a swab, pick up a few well-isolated  colonies and prepare a suspension with a
      turbidity equivalent to 4 McFarland,  ensuring it is well mixed .
  •   The suspension should be used immediately after preparation.

4.   Inoculation of the Strip

•   Distribute the prepared bacterial suspension  into the cupules, avoiding the formation of
    bubbles (tilt the stri p slightly forwards and place the tip of the pipette or PSIpette
against
    the side of the cupule):
-   Only fill the tube part of the first 7 microtubes (PEN  to URE ): about 50  µl.
-   Fill tube and cupule of the last 3 microtubes LIP/ProA , PAL/GGT ,  β GAL/IND:
about 150 µl, avoiding the formation of a convex meniscus.
  •   Cover the first 7 tests (PEN  to URE ) with mineral oil (underlined tests).

NOTE:  The quality of the filling is very import ant: tubes which are insufficiently or
          excessively full may cause false positive or false negative results.
        •   Close the incubation box.
        •   Incubate for 2 hours at 35-37
o
C  in aerobic conditions.


PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 30

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\04\v03  Page 3 of  4
Technical Manual   


5.   Incubation

  Incubate for 2 hours at 35-37
o
C in aerobic conditions.

6.   Reading the Strip

  Refer to the Reactions Table for a desc ription of how to  read the reactions.

  Note all spontaneous reactions (PEN to β GAL) and record them as + or -.
  •  Add 1 drop of ZYM B reagent to  microtubes 8 and 9: LIP/ProA  and PAL/GGT.
  •  Add 1 drop of JAMES reagent to microtube 10:  β GAL/IND.
  •   Wait 2 minutes then read the reactions by referring to  the Reading Table in this package
    insert and record them on the result sheet.
-   If the LIP reaction is positive (blue pigment), interpret the ProA  reaction as
negative , whether the ZYM B reagent has been added or not.
-   If, after a 2-hour incubation period, severa l reactions (fermentation, penicillinase)
are doubtful, re-incubate the strip for anot her 2 hours and read the reactions again
(the enzymatic tests should not  be re-read in this case).

Reactions Table

RESULTS  TESTS REACTIONS  SUBSTRATES QTY
(mg)
NEGATIVE POSITIVE

1) PEN

PENicillinase

Penicillin G

1.36

Blue
(penicillinase absent)

Yellow
Yellow-green
Yellow-blue
(penicillinase present

2) GLU
3) FRU
4) MAL
5) SAC

GLUcose (Acidification)
FRUctose (Acidification)
MALtose (Acidification)
SACcharose/Sucrose
(Acidification)

Glucose
Fructose
Maltose
Sucrose

0.5
0.1
0.5

Red
Red-orange

Yellow
Orange


6) ODC

Ornithine DeCarboxylase

Ornithine

0.55

Yellow-green
Grey-green

Blue

7) URE

UREease

Urea

0.41

Yellow

Pink-violet

8a) LIP

LIPase

5-bromo-3-indoxyl-caprate

0.033

Colorless
Pale grey

Blue
(+precipitate)


9a) PAL

Alkaline Phosphatase

Para-Nitrophenyl-phosphate 2CHA

0.038

Colorless
Pale yellow

Yellow


10a) β GAL

Beta GALactosidaase

Para-Nitrophenyl-BD
galactopyranoside

0.04

Colorless

Yellow

PROCEDURE MANUAL
TORONTO MEDICAL LABORATORIES / MOUNT SINAI HOSPITAL MICROBIOLOGY DEPARTMENT 

Page 31

TML/MSH Microbiology Department
Policy & Procedure Manual
Policy # MI\TECH\04\04\v03  Page 4 of  4
Technical Manual   

Reactions Table (Cont'd)

RESULTS  TESTS REACTIONS  SUBSTRATES QTY
(mg)
NEGATIVE POSITIVE

ZYM B / 3 min


8b) ProA


Proline Arylamidase
If LIP is +. ProA is always -


Proline-4-methoxy-
β  naphthylamide


0.056


Yellow
Pale orange
(brown if LIP +)

Orange

ZYM B / 3 min


9b) GGT


Gamma Glutamyl Transferase


Gamma glutamyl
4-methoxy-
β  naphthylamide


0.049

Yellow
Pale orange
(yellow-orange if PAL +)

Orange


JAMES / 3 min


10b) IND


INDole


Tryptophane


0.036

Colorless


Pink

Quality Control

To be performed on receipt of every new  lot of strip by the Q.C bench technologist.

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